The Impact of Organoid to Assembloid Technology in Biomedical Research

Anna Meiliana, Angliana Chouw, Retina Shyallala Askandar, Blessari Tesalonika Woran, Irma Rahayu Latarissa, Andi Wijaya

Abstract


Organoids, three-dimensional, self-organized structures derived from pluripotent or adult stem cells, have revolutionized biomedical research by overcoming the inherent limitations of traditional 2D cultures and animal models. This review traces the evolution of organoid technology from initial studies to the contemporary "assembloid" phase, examining systemic inter-organ communication. The primary discovery of this review resides in the shift from descriptive modelling to a functional "Comparative Paradigm." A major perspective addressed is the transition from exclusively descriptive modelling to a functional 'Comparative Paradigm.' By merging developmental biology with bioengineering, a systematic framework is created to discover the most clinically relevant models, employing patient-derived 'avatars' to enhance personalized medicine and and high-throughput drug discovery. Ultimately, this review provides a systematic framework for identifying the most clinically applicable models by integrating developmental biology and bioengineering. The lack of vascularization, embryonic immaturity, and batch-to-batch repeatability issues remain major technical obstacles despite their potential. Finally, we explore potential future approaches in bioengineering, including the incorporation of 3D bioprinting, AI-driven imaging, and microfluidics (organ-on-a-chip). Organoid technology is a key component of next-generation medicine because it bridges the gap between "bench and bedside," providing previously unattainable insights into human biology and illness.

KEYWORDS: organoids, stem cells, disease modeling, bioengineering, personalized medicine, assembloids, regenerative medicine; organ-on-a-chip, translational manufacturing


Full Text:

PDF

References


Davies JA, Lawrence ML. Organoids and Mini-Organs. Cambridge: Academic Press; 2018, CrossRef.

Dutta D, Heo I, Clevers H. Disease modeling in stem cell-derived 3D organoid systems. Trends Mol Med. 2017; 23(5): 393-410, CrossRef.

Ge JY, Wang Y, Li QL, Liu FK, Lei QK, Zheng YW. Trends and challenges in organoid modeling and expansion with pluripotent stem cells and somatic tissue. PeerJ. 2024; 12: e18422, CrossRef.

Yang S, Hu H, Kung H, Zou R, Dai Y, Hu Y, et al. Organoids: The current status and biomedical applications. MedComm. 2023; 4(3): e274, CrossRef.

Malik DA, Schmieder EAS, Genova G, Gaskins J, Martin II RCG. Organoids in translation: A bench-to-bedside framework for pancreatic cancer precision medicine. J Transl Med. 2026; 24(1): 136, CrossRef.

Huang Y, Huang Z, Tang Z, Chen Y, Huang M, Liu H, et al. Research progress, challenges, and breakthroughs of organoids as disease models. Front Cell Dev Biol. 2021: 9: 740574, CrossRef.

Zhang S, Wan Z, Kamm RD. Vascularized organoids on a chip: Strategies for engineering organoids with functional vasculature. Lab Chip. 2021; 21(3): 473-88, CrossRef.

Wyle Y, Lu N, Hepfer J, Sayal R, Martinez T, Wang A. The role of biophysical factors in organ development: Insights from current organoid models. Bioengineering. 2024; 11(6): 619, CrossRef.

Sandoval SO, Cappuccio G, Kruth K, Osenberg S, Khalil SM, Méndez-Albelo NM, et al. Rigor and reproducibility in human brain organoid research: Where we are and where we need to go. Stem Cell Reports. 2024; 19(6): 796, CrossRef.

Min S, Kim S, Cho SW. Gastrointestinal tract modeling using organoids engineered with cellular and microbiota niches. Exp Mol Med. 2020; 52(2): 227-37, CrossRef.

Zhao Y, Landau S, Okhovatian S, Liu C, Lu RXZ, Lai BFL, et al. Integrating organoids and organ-on-a-chip devices. Nat Rev Bioeng. 2024; 2(7): 588-608, CrossRef.

Saleh J, Mercier B, Xi W. Bioengineering methods for organoid systems. Biol Cell. 2021; 113(12): 475-91, CrossRef.

Balkhair O, Albalushi H. Artificial intelligence in organoid-based disease modeling: A new frontier in precision medicine. Biomimetics. 2025; 10(12): 845, CrossRef.

Lombardozzi G, Szebényi K, Giorgi C, Topi S, d'Angelo M, Castelli V, et al. Next-gen stroke models: The promise of assembloids and organ-on-a-chip systems. Cells. 2025; 14(24): 1986, CrossRef.

Elfatimi E, Lekbach Y, Prakash S, Karan S, Dorotta JC, Garcia A, et al. Artificial intelligence-, organoid-, and organ-on-chip-powered models to improve pre-clinical animal testing of vaccines and immunotherapeutics: potential, progress, and challenges. Front Artif Intell. 2025; 8: 1681106, CrossRef.

Sun Y, Pan W. Brain organoids: A new paradigm for studying human neuropsychiatric disorders. Front Neurosci. 2025; 19: 1699814, CrossRef.

Wilson H V. On some phenomena of coalescence and regeneration in sponges. J Exp Zool. 1907; 5(2): 245-58, CrossRef.

Takahashi K, Yamanaka S. Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell. 2006; 126(4): 663-76, CrossRef.

Meiliana A, Wijaya A. Progress and future challenges of human induced pluripotents stem cell in regenerative medicine. Indones Biomed J. 2011; 3(2): 76-92, CrossRef.

Karagiannis P, Takahashi K, Saito M, Yoshida Y, Okita K, Watanabe A, et al. Induced pluripotent stem cells and their use in human models of disease and development. Physiol Rev. 2019; 99(1): 79-114, CrossRef.

Sato T, Vries RG, Snippert HJ, Van De Wetering M, Barker N, Stange DE, et al. Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche. Nature. 2009; 459(7244): 262-5, CrossRef.

Sato T, Clevers H. Primary mouse small intestinal epithelial cell cultures. Methods Mol Biol. 2013; 945: 319-28, CrossRef.

Lancaster MA, Renner M, Martin CA, Wenzel D, Bicknell LS, Hurles ME, et al. Cerebral organoids model human brain development and microcephaly. Nature. 2013; 501(7467): 373-9, CrossRef.

Gjorevski N, Sachs N, Manfrin A, Giger S, Bragina ME, Ordóñez-Morán P, et al. Designer matrices for intestinal stem cell and organoid culture. Nature. 2016; 539(7630): 560-4, CrossRef.

Brassard JA, Lutolf MP. Engineering stem cell self-organization to build better organoids. Cell Stem Cell. 2019; 24(6): 860-76, CrossRef.

Dahl-Jensen S, Grapin-Botton A. The physics of organoids: Abiophysical approach to understanding organogenesis. Development. 2017; 144(6): 946-51, CrossRef.

Kratochvil MJ, Seymour AJ, Li TL, Paşca SP, Kuo CJ, Heilshorn SC. Engineered materials for organoid systems. Nat Rev Mater. 2019; 4(9): 606-22, CrossRef.

Engler AJ, Sen S, Sweeney HL, Discher DE. Matrix elasticity directs stem cell lineage specification. Cell. 2006; 126(4): 677-89, CrossRef.

Ramesh S, Deep A, Tamayol A, Kamaraj A, Mahajan C, Madihally S. Advancing 3D bioprinting through machine learning and artificial intelligence. Bioprinting. 2024; 38: e00331, CrossRef.

Hoang P, Ma Z. Biomaterial-guided stem cell organoid engineering for modeling development and diseases. Acta Biomater. 2021; 132: 23-36, CrossRef.

Silva TP, Cotovio JP, Bekman E, Carmo-Fonseca M, Cabral JMS, Fernandes TG. Design principles for pluripotent stem cell-derived organoid engineering. Stem Cells Int. 2019; 2019(1): 4508470, CrossRef.

Lewis A, Keshara R, Kim YH, Grapin-Botton A. Self-organization of organoids from endoderm-derived cells. J Mol Med. 2020; 99(4): 449-62, CrossRef.

Sljukic A, Green Jenkinson J, Niksic A, Prior N, Huch M. Advances in liver and pancreas organoids: how far we have come and where we go next. Nat Rev Gastroenterol Hepatol. 2025; 23(1): 44-64, CrossRef.

Kim J, Koo BK, Knoblich JA. Human organoids: Model systems for human biology and medicine. Nat Rev Mol Cell Biol. 2020; 21(10): 571-84, CrossRef.

Chitrangi S, Vaity P, Jamdar A, Bhatt S. Patient-derived organoids for precision oncology: A platform to facilitate clinical decision making. BMC Cancer. 2023; 23(1): 689, CrossRef.

Jensen KB, Little MH. Organoids are not organs: Sources of variation and misinformation in organoid biology. Stem Cell Rep. 2023; 18(6): 1255-70, CrossRef.

Shankaran A, Prasad K, Chaudhari S, Brand A, Satyamoorthy K. Advances in development and application of human organoids. 3 Biotech 2021; 11(6): 257, CrossRef.

Lee H, Im JS, Choi D Bin, Woo DH. Trends in the global organoid technology and industry: From organogenesis in a dish to the commercialization of organoids. Organoid. 2021; 1: e11, CrossRef.

Marx U, Accastelli E, David R, Erfurth H, Koenig L, Lauster R, et al. An individual patient's "body" on chips-How organismoid theory can translate into your personal precision therapy approach. Front Med . 2021; 8(13): 728866, CrossRef.

Bartfeld S. Realizing the potential of organoids-An interview with Hans Clevers. J Mol Med. 2021; 99(4): 443-7, CrossRef.

Tang XY, Wu S, Wang D, Chu C, Hong Y, Tao M, et al. Human organoids in basic research and clinical applications. Signal Transduct Target Ther. 2022; 7(1): 168, CrossRef.

Marlina M, Rahmadian R, Armenia A, Widowati W, Rizal R, Kusuma HSW, et al. Isolation, characterization, proliferation and differentiation of synovial membrane-derived mesenchymal stem cells (SM-MSCs) from osteoarthritis patients. Mol Cell Biomed Sci. 2020; 4(2): 76-82, CrossRef.

Turhan AG, Hwang JW, Chaker D, Tasteyre A, Latsis T, Griscelli F, et al. iPSC-derived organoids astherapeutic models in regenerative medicine and oncology. Front Med. 2021; 8: 728543, CrossRef.

Dorota A, Maryniak N, Mariankowska A, Milczarek C, Dorota M, Zywiec W, et al. Induced pluripotent stem cells (iPSC) and their use in disease modeling. Cureus. 2025; 17(10): e93999, CrossRef.

Liu X, Zhou Z, Zhang Y, Zhong H, Cai X, Guan R. Recent progress on the organoids: Techniques, advantages and applications. Biomed Pharmacother. 2025; 185(12): 117942, CrossRef.

Xin-Yi J, Yan-Ran W, Pin-Ru D, Shi-Yi Q, Hai-Tao J. Organoids in cancer therapies: A comprehensive review. Front Bioeng Biotechnol. 2025; 13: 1607488, CrossRef.

Tripathi D, Reddy S. iPSC model of congenital heart disease predicts disease outcome. Cell Stem Cell. 2022; 29(5): 659-60, CrossRef.

Sullivan KM, Ko E, Kim EM, Ballance WC, Ito JD, Chalifoux M, et al. Extracellular microenvironmental control for organoid assembly. Tissue Eng Part B Rev. 2022; 28(6): 1209-22, CrossRef.

Thakuri PS, Liu C, Luker GD, Tavana H. Biomaterials-based approaches to tumor spheroid and organoid modeling. Adv Healthc Mater. 2018; 7(6): 1700980, CrossRef.

Aisenbrey EA, Murphy WL. Synthetic alternatives to matrigel. Nat Rev Mater. 2020; 5(7): 539-51, CrossRef.

Kozlowski MT, Crook CJ, Ku HT. Towards organoid culture without matrigel. Commun Biol. 2021; 4(1): 1387, CrossRef.

Xie Z, Wang L, Zhang Y. Advances in organoid culture research. Glob Med Genet. 2022; 09(04): 268-76, CrossRef.

Sozzi E, Kajtez J, Bruzelius A, Wesseler MF, Nilsson F, Birtele M, et al. Silk scaffolding drives self-assembly of functional and mature human brain organoids. Front Cell Dev Biol. 2022; 10: 1023279, CrossRef.

Zhu Y, Sun L, Wu X, Gu Z, Zhao Y. Engineered human organoids for biomedical applications. Adv Funct Mater. 2024; 34(11): 2310961, CrossRef.

Bayir E, Sendemir A, Missirlis YF. Mechanobiology of cells and cell systems, such as organoids. Biophys Rev. 2019; 11(5): 721-8, CrossRef.

Rossi G, Manfrin A, Lutolf MP. Progress and potential in organoid research. Nat Rev Genet. 2018; 19(11): 671-87, CrossRef.

Ishihara K, Tanaka EM. Spontaneous symmetry breaking and pattern formation of organoids. Curr Opin Syst Biol. 2018; 11: 123-8, CrossRef.

Fernandes TG. Organoids as complex (bio)systems. Front Cell Dev Biol. 2023; 11: 1268540, CrossRef.

Kishimoto K, Iwasawa K, Sorel A, Ferran-Heredia C, Han L, Morimoto M, et al. Directed differentiation of human pluripotent stem cells into diverse organ-specific mesenchyme of the digestive and respiratory systems. Nat Protoc. 2022; 17(11): 2699-719, CrossRef.

Sthijns MMJPE, Lapointe VLS, Van Blitterswijk CA. Building complex life through self-organization. Tissue Eng Part A. 2019; 25(19-20): 1341-6, CrossRef.

Tortorella I, Argentati C, Emiliani C, Martino S, Morena F. The role of physical cues in the development of stem cell-derived organoids. Eur Biophys J. 2021; 51(2): 105-17, CrossRef.

Blatchley MR, Anseth KS. Middle-out methods for spatiotemporal tissue engineering of organoids. Nat Rev Bioeng. 2023; 1(5): 329-45, CrossRef.

Goldrick C, Guri I, Herrera-Oropeza G, O'Brien-Gore C, Roy E, Wojtynska M, et al. 3D multicellular systems in disease modelling: From organoids to organ-on-chip. Front Cell Dev Biol. 2023; 11: 1083175, CrossRef.

Garreta E, Kamm RD, Chuva de Sousa Lopes SM, Lancaster MA, Weiss R, Trepat X, et al. Rethinking organoid technology through bioengineering. Nat Mater. 2021; 20(2): 145-55, CrossRef.

Verstegen MMA, Coppes RP, Beghin A, De Coppi P, Gerli MFM, de Graeff N, et al. Clinical applications of human organoids. Nat Med. 2025; 31(2): 409-21, CrossRef.

Saini A. Cystic fibrosis patients benefit from mini guts. Cell Stem Cell. 2016; 19(4): 425-7, CrossRef.

Rodriguez Mier N, Cuyx S, De Boeck K, Proesmans M, Boon M, Dupont L, et al. Correlation between patient-derived intestinal organoids and clinical responses to CFTR modulators in people with cystic fibrosis homozygous for F508del. J Cyst Fibros. 2025; 24(5): 939-45, CrossRef.

Laselva O, Conese M, Laselva O, Conese M. Three-dimensional airway spheroids and organoids for cystic fibrosis research. Journal of Respiration. 2021; 1(4): 22947, CrossRef.

Keio University [Internet]. Scientists Achieve Record-breaking Growth in Miniature, Functional Liver Models [updated 2025 Apr 17 cited 2026 Mar 24]. Available from: https://www.keio.ac.jp/.

Luo L, Liu L, Ding Y, Dong Y, Ma M. Advances in biomimetic hydrogels for organoid culture. Chem Commun. 2023; 59(64): 9675-86, CrossRef.

Stüve P, Nerb B, Harrer S, Wuttke M, Feuerer M, Junger H, et al. Analysis of organoid and immune cell co-cultures by machine learning-empowered image cytometry. Front Med. 2023; 10: 1274482, CrossRef.

Annita A, Revilla G, Ali H, Almurdi A. Adipose-derived mesenchymal stem cell (AD-MSC)-like cells restore nestin expression and reduce amyloid plaques in aluminum chloride (AlCl3)-driven Alzheimer's rat models. Mol Cell Biomed Sci. 2024; 8(3): 159-66, CrossRef.

Sulaksono HLS, Annisa A, Ruslami R, Mufeeduzzaman M, Panatarani C, Hermawan W, et al. Recent advances in graphene oxide-based on organoid culture as disease model and cell behavior - A systematic literature review. Int J Nanomedicine. 2024; 19: 6201-28, CrossRef.

Kim J Il, Imaizumi K, Jurjuț O, Kelley KW, Wang D, Thete MV, et al. Human assembloid model of the ascending neural sensory pathway. Nature. 2025; 642(8066): 143-53, CrossRef.

Han Y, Duan X, Yang L, Nilsson-Payant BE, Wang P, Duan F, et al. Identification of SARS-CoV-2 inhibitors using lung and colonic organoids. Nature. 2020; 589(7841): 270, CrossRef.

Dilz J, Auge I, Groeneveld K, Reuter S, Mrowka R. A proof-of-concept assay for quantitative and optical assessment of drug-induced toxicity in renal organoids. Sci Rep. 2023; 13(1): 6167, CrossRef.

Xu J, Pham MD, Corbo V, Ponz-Sarvise M, Oni T, Öhlund D, et al. Advancing pancreatic cancer research and therapeutics: The transformative role of organoid technology. Exp Mol Med. 2025; 57(1): 50-8, CrossRef.

Levy RJ, Paşca SP. What haveorganoids and assembloids taught us about the pathophysiology of neuropsychiatric disorders? Biol Psychiatry. 2023; 93(7): 632-41, CrossRef.

Osaki T, Duenki T, Chow SYA, Ikegami Y, Beaubois R, Levi T, et al. Complex activity and short-term plasticity of human cerebral organoids reciprocally connected with axons. Nat Commun. 2024; 15(1): 2945, CrossRef.

Ouaidat S, Bellapianta A, Ammer-Pickhardt F, Taghipour T, Bolz M, Salti A. Exploring organoid and assembloid technologies: A focus on retina and brain. Expert Rev Mol Med. 2025; 27: e14, CrossRef.

Wang D, Villenave R, Stokar-Regenscheit N, Clevers H. Human organoids as 3D in vitro platforms for drug discovery: Opportunities and challenges. Nat Rev Drug Discov. 2026; 25(3): 204-26, CrossRef.

Thorel L, Perréard M, Florent R, Divoux J, Coffy S, Vincent A, et al. Patient-derived tumor organoids: a new avenue for preclinical research and precision medicine in oncology. Exp Mol Med. 2024; 56(7): 1531-51, CrossRef.

Parvatam S, Pistollato F, Marshall LJ, Furtmann F, Jahagirdar D, Chakraborty Choudhury M, et al. Human-based complex in vitro models: Their promise and potential for rare disease therapeutics. Front Cell Dev Biol. 2025; 13: 1526306, CrossRef.

Eisen B, Binah O. Modeling Duchenne Muscular Dystrophy cardiomyopathy with patients' induced pluripotent stem-cell-derived cardiomyocytes. Int J Mol Sci. 2023; 24(10): 8657, CrossRef.

Means JC, Martinez-Bengochea AL, Louiselle DA, Nemechek JM, Perry JM, Farrow EG, et al. Rapid and scalable personalized ASO screening in patient-derived organoids. Nature. 2025; 638(8049): 237-43, CrossRef.

Picollet-D'hahan N, Zuchowska A, Lemeunier I, Le Gac S. Multiorgan-on-a-chip: A systemic approach to model and decipher inter-organ communication. Trends Biotechnol. 2021; 39(8): 788-810, CrossRef.

Baptista LS, Porrini C, Kronemberger GS, Kelly DJ, Perrault CM. 3D organ-on-a-chip: The convergence of microphysiological systems and organoids. Front Cell Dev Biol. 2022; 10: 1043117, CrossRef.

Deben C, De La Hoz EC, Compte M Le, Van Schil P, Hendriks JMH, Lauwers P, et al. OrBITS: Label-free and time-lapse monitoring of patient derived organoids for advanced drug screening. Cell Oncol. 2023; 46(2): 299-314, CrossRef.

Metzger JJ, Pereda C, Adhikari A, Haremaki T, Galgoczi S, Siggia ED, et al. Deep-learning analysis of micropattern-based organoids enables high-throughput drug screening of Huntington's disease models. Cell Reports Methods. 2022; 2(9): 100297, CrossRef.

Deng S, Li C, Cao J, Cui Z, Du J, Fu Z, et al. Organ-on-a-chip meets artificial intelligence in drug evaluation. Theranostics. 2023; 13(13): 4526-58, CrossRef.

Deng J, Qu Y, Liu T, Jing B, Zhang X, Chen Z, et al. Recent organ-on-a-chip advances toward drug toxicity testing. Microphysiol Syst. 2018; 2: 8, CrossRef.

ISO [Internet]. ISO/WD 25430-2 Biotechnology - Organoids. Part 2: Manufacturing and Quality Control [cited 2026 Mar 25]. Available from: https://www.iso.org/.

Verduin M, Hoeben A, De Ruysscher D, Vooijs M. Patient-derived cancer organoids as predictors of treatment response. Front Oncol. 2021; 11: 641980, CrossRef.

Wensink GE, Elias SG, Mullenders J, Koopman M, Boj SF, Kranenburg OW, et al. Patient-derived organoids as a predictive biomarker for treatment response in cancer patients. NPJ Precis Oncol. 2021; 5(1): 30, CrossRef.

Sasaki N, Clevers H. Studying cellular heterogeneity and drug sensitivity in colorectal cancer using organoid technology. Curr Opin Genet Dev. 2018; 52: 117-22, CrossRef.

Ooft SN, Weeber F, Dijkstra KK, McLean CM, Kaing S, van Werkhoven E, et al. Patient-derived organoids can predict response to chemotherapy in metastatic colorectal cancer patients. Sci Transl Med. 2019; 11(513): eaay2574, CrossRef.

Polak R, Zhang ET, Kuo CJ. Cancer organoids 2.0: Modelling the complexity of the tumour immune microenvironment. Nat Rev Cancer. 2024; 24(8): 523-39, CrossRef.

Jacobs S, Butterworth W, Griffiths EA. Patient-derived organoids in hepatobiliary pancreatic cancer research: Their uses and limitations. World J Gastroenterol. 2025; 31(36): 110684, CrossRef.

Mulaudzi PE, Abrahamse H, Crous A. Insights on three dimensional organoid studies for stem cell therapy in regenerative medicine. Stem Cell Rev Rep. 2023; 20(2): 509-23, CrossRef.

de Jongh D, Massey EK, Berishvili E, Fonseca LM, Lebreton F, Bellofatto K, et al. Organoids: A systematic review of ethical issues. Stem Cell Res Ther. 2022; 13(1): 337, CrossRef.

Cajkova J, Trebunova M, Bacenkova D. Organoids as models for tissue engineering and biomedical applications. Acta Tecnología. 2025; 11(3): 113-9, CrossRef.

Loupy A, Preka E, Chen X, Wang H, He J, Zhang K. Reshaping transplantation with AI, emerging technologies and xenotransplantation. Nat Med. 2025; 31(7): 2161-73, CrossRef.

Akhtar Z Bin, Gupta A Das. Integrative approaches for advancing organoid engineering: From mechanobiology to personalized therapeutics. Journal of Applied Artificial Intelligence. 2024; 5(1): 1-27, CrossRef.

Dadheech N, Bermúdez de León M, Czarnecka Z, Cuesta-Gomez N, Jasra IT, Pawlick R, et al. Scale up manufacturing approach for production of human induced pluripotent stem cell-derived islets using Vertical Wheel® bioreactors. NPJ Regen Med. 2025; 10(1): 24, CrossRef.

Rivera-Ordaz A, Peli V, Manzini P, Barilani M, Lazzari L. Critical analysis of cGMP large-scale expansion process in bioreactors of human induced pluripotent stem cells in the framework of quality by besign. BioDrugs. 2021; 35(6): 693-714, CrossRef.

Jeon EY, Sorrells L, Abaci HE. Biomaterials and bioengineering to guide tissue morphogenesis in epithelial organoids. Front Bioeng Biotechnol. 2022; 10: 1038277, CrossRef.

Mukhopadhyay C, Paul MK. Organoid-based 3D in vitro microphysiological systems as alternatives to animal experimentation for preclinical and clinical research. Arch Toxicol. 2023; 97(5): 1429-31, CrossRef.

Zheng F, Xiao Y, Liu H, Fan Y, Dao M. Patient-specific organoid and organ-on-a-chip: 3D cell-culture meets 3D printing and numerical simulation. Adv Biol. 2021; 5(6): 2000024, CrossRef.

Jundan SF, Amalia R, Sartika CR. Mesenchymal stem cell in 3D culture: Diminishing cell senescence in cryopreservation and long-term expansion. Mol Cell Biomed Sci. 2023; 7(3): 133-40, CrossRef.

Ye R, Zhang Y, Xu W, Lai L, Zhang Z, Chen Y, et al. AI and organoid platforms for brain-targeted theranostics. Theranostics. 2026; 16(2): 876-97, CrossRef.

Chouw A, Putera BW, Sartika CR, Diantini A. Positive correlation between very small embryonic stem cell, hematopoietic stem cell, and endothelial progenitor cell in umbilical cord blood unit. Indones Biomed J. 2018; 10(3): 231-5, CrossRef.

Brumbaugh J, Aguado BA, Lysaght T, Goldstein LSB. Human fetal tissue is critical for biomedical research. Stem Cell Reports. 2023; 18(12): 2300, CrossRef.

Andrews MG, Kriegstein AR. Challenges of organoid research. Annu Rev Neurosci. 2022; 45: 23, CrossRef.

Liu K, Chen X, Fan Z, Ren F, Liu J, Hu B. From organoids to organoids-on-a-chip: Current applications and challenges in biomedical research. Chin Med J. 2025; 138(7): 792-807, CrossRef.

Meiliana A, Wijaya A. Epigenetic reprogramming induced pluripotency. Indones Biomed J. 2011; 3(2): 93-109, CrossRef.

Cahan P, Daley GQ. Origins and implications of pluripotent stem cell variability and heterogeneity. Nat Rev Mol Cell Biol. 2013; 14(6): 357-68, CrossRef.

Aiello G, Nemir M, Vidimova B, Ramel C, Viguie J, Ravera A, et al. Increased reproducibility of brain organoids through controlled fluid dynamics. bioRxiv. 2025; 2025: 1-48, CrossRef.

Flood P, Hanrahan N, Nally K, Melgar S. Human intestinal organoids: Modeling gastrointestinal physiology and immunopathology - current applications and limitations. Eur J Immunol. 2024; 54(2): 2250248, CrossRef.

Amazing Erasmus MC [Internet]. Integrating Immune Cells to Organoids Opens Doors for Viral Research [cited 2026 Mar 26]. Available from: https://amazingerasmusmc.nl/.

Shaw CA, Verstrate M, Graniczkowska K, Risoen KR, Dini P, Weimer BC. The use of stem cells and organoids for modeling host-microbe interactions in low-biomass tissues. Front Cell Infect Microbiol. 2025; 15: 1641366, CrossRef.

Quintard C, Tubbs E, Jonsson G, Jiao J, Wang J, Werschler N, et al. A microfluidic platform integrating functional vascularized organoids-on-chip. Nat Commun. 2024; 15(1): 1452, CrossRef.

Matthews JM, Schuster B, Kashaf SS, Liu P, Ben-Yishay R, Ishay-Ronen D, et al. OrganoID: A versatile deep learning platform for tracking and analysis of single-organoid dynamics. PLoS Comput Biol. 2022; 18(11): e1010584, CrossRef.




DOI: https://doi.org/10.18585/inabj.v18i2.4052

Copyright (c) 2026 The Prodia Education and Research Institute

Creative Commons License
This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.

 Indexed by:

                  

                     

          

 

 

The Prodia Education and Research Institute